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SRX26210216: Whole genome sequencing of Zymoseptoria tritici: ZT662
1 ILLUMINA (Illumina HiSeq 3000) run: 6.2M spots, 1.9G bases, 785.2Mb downloads

Design: Library preparation using standard protocols of MP-GC Cologne (DNA FS Library); 2x150bp
Submitted by: University of Kiel / MPI for Evolutionary Biology
Study: Population genomics of Iranian wheat- and Aegilops-infecting Zymoseptoria tritici isolates
show Abstracthide Abstract
Host specialisation is considered a strong driver of pathogen evolution. In this project, we isolated unique collections of Z. tritici from wild (Aegilops spp.) and domesticated (Triticum aestivum) host grasses in the Middle East. Using a clone-corrected subset of isolates from each collection, we then performed whole-genome sequencing of each isolate with the aim to identify evolutionary and molecular patterns of host specialisation using population genomics approaches.
Sample:
SAMN43819812 • SRS22752281 • All experiments • All runs
Library:
Name: ZT662
Instrument: Illumina HiSeq 3000
Strategy: WGS
Source: GENOMIC
Selection: RANDOM PCR
Layout: PAIRED
Runs: 1 run, 6.2M spots, 1.9G bases, 785.2Mb
Run# of Spots# of BasesSizePublished
SRR308094066,205,4411.9G785.2Mb2024-10-02

ID:
35373260

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